Forensic RNA Knowledge Base

Basic Information

Symbol

hsa_UBAP2_0000600

RNA Class

transcript (circRNA)

Alias

hsa-UBAP2_0207

Host gene

UBAP2

Type of circRNA

Exon-Exon

Location (GRCh37)

9:33922685-33922876 UCSC (hg19)

Location (GRCh38)

9:33922687-33922878 UCSC (hg38)

External Database

circbank

Secondary Structure

Generated by RNAfold

Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.

Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.

Minimum free energy

-51.60 kcal/mol

Thermodynamic ensemble

Free Energy: -54.20 kcal/mol

Frequency: 0.0146

Diversity: 35.00

MFE Structure Visualization

Structure Prediction

MFE Structure Prediction

...........(((((.......((.(((....))).))........)))))....((((..((((((....))))))..))))..(((.((((((...))))..)).)))..............((((((((.((.....(((((((..........))))))).........))...)))))))).....

Thermodynamic Ensemble Prediction

.....,{....(((((,......((.(((....))).}}........)))))....((((..((((((....))))))..))))..{||.{{{(({...)))}.,)).}}),.............((((((((.{{.....(((((((..........))))))).........},...))))))))...,}

Basic Information

Secondary Structure

Structure Prediction

Forensic Context