Forensic RNA Knowledge Base

Basic Information

Symbol

hsa_UBE3A_0011200

RNA Class

transcript (circRNA)

Alias

hsa-UBE3A_0097

Host gene

UBE3A

Type of circRNA

Exon-Intron

Location (GRCh37)

15:25653767-25665899 UCSC (hg19)

Location (GRCh38)

15:25408620-25420752 UCSC (hg38)

External Database

circbank

Secondary Structure

Generated by RNAfold

Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.

Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.

Minimum free energy

-80.80 kcal/mol

Thermodynamic ensemble

Free Energy: -87.23 kcal/mol

Frequency: 0.0000

Diversity: 69.77

MFE Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((.((..(((((((.((((((......((((((..........((((.(((...((...))...))).))))..............((.((((((..((((...((((.(((.........)))...))))..))))..)))))).))...(((((((((.(((((((.((.......))))))..)))((((.(((......))).))))......)))))))))((((((((((((...))))((((.....))))))))))))))))))...)))))).)))))))....))..))))).(((((..........)))))(((((...)))))..

Thermodynamic Ensemble Prediction

.....(((((.((..(((((((.((((((......((((((,.........((((.(((...((...))...))).))))...........({{{{((((((({,((((.,.((((.(((.........)))...)))).,)))),,|||(((..|,{{{,,,,||||.,|||{{{|||,,,.,,.,{}},...)))}))))|||,,,...}}}.}))))))))))))),,,,.{(((((((,(((...,|,,,,{{.....))),))))))))))))))..,)))))).)))))))....}),.))))).(((((..,....,..)))))(((({...)))))..

Basic Information

Secondary Structure

Structure Prediction

Forensic Context