Basic Information
Symbol
hsa_USP22_0003500
RNA Class
transcript (circRNA)
Alias
hsa_circ_0042458
hsa_circUSP22_025
hsa-USP22_0012
Host gene
USP22
Type of circRNA
Exon-Exon
Location (GRCh37)
17:20910209-20914622
UCSC (hg19)
Location (GRCh38)
17:21006896-21011309
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-119.30 kcal/mol
Thermodynamic ensemble
Free Energy:
-124.84 kcal/mol
Frequency:
0.0001
Diversity:
46.85
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((...))))(..........(((....)))....((((((((...((((((......((((....((((.(((((((....))))).)).))))....))))....)))))).......((((.((......))))))....(((((.((((.(...........((((...((((((((((......))).....)))))))...))))..........))))))))))...((((((....((((((.(........).)))))).))))))(((..((....))..)))........)))))))).((.(((((..(((.......)))..))))).))(((((.....(((((......)))))..))))))
Thermodynamic Ensemble Prediction
((({...}))){..........(((....)))....((((((((...((((((......((((....((((.(((((((....))))).)).))))....))))....)))))).......((((.((......))))))....(((((.((((.{..,........((((...((((((((((......))).....)))))))...)))).......,..})))))))))..,{(((((,,..((((((.(........).)))))).)))))}|,{..{{....)}.,})}.....,,.)))))))).((.(((((..(((.......)))..))))),)}(((({..,,.(((((......))))).}))))))
Forensic Context
No forensic context available.