Basic Information
Symbol
hsa_VIM_0006000
RNA Class
transcript (circRNA)
Alias
hsa_circ_0017879
hsa_circVIM_018
Host gene
VIM
Type of circRNA
Exon-Exon
Location (GRCh37)
10:17277168-17277888
UCSC (hg19)
Location (GRCh38)
10:17235169-17235889
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-76.60 kcal/mol
Thermodynamic ensemble
Free Energy:
-80.96 kcal/mol
Frequency:
0.0008
Diversity:
70.73
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(.....)((((...((((.....))))..(((((.(((....))).)))))....((((......((((.......))))......))))....((.(((((........(((((((((((....((((....))))...))).......((((((((((((......))))))))))))...(((.((..(((....)))..))..)))((((((.(((((.....)))))))))))......))))))))))))).)).))))
Thermodynamic Ensemble Prediction
(....,|{,(({(.{{{|,,,..})}}..(((((,(({....}}}.)))))...|(,((,.....(({{.......))))..,,..||||{.{,.,,(((({,,..|||,{((({{,,,{{,,,.|||{.,,,}))),,.}))...,,,,((((((((((((......))))))))))))...(((.,(,,(((....))).}))..))){(((((.(((((.....)))))))))))....,,))))))||||.,..,}.))))
Forensic Context
No forensic context available.