Forensic RNA Knowledge Base

Basic Information

Symbol

hsa_XPO1_0010800

RNA Class

transcript (circRNA)

Alias

hsa-XPO1_0188

Host gene

XPO1

Type of circRNA

Exon-Exon

Location (GRCh37)

2:61717777-61749818 UCSC (hg19)

Location (GRCh38)

2:61490642-61522683 UCSC (hg38)

External Database

circbank

Secondary Structure

Generated by RNAfold

Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.

Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.

Minimum free energy

-39.00 kcal/mol

Thermodynamic ensemble

Free Energy: -42.31 kcal/mol

Frequency: 0.0046

Diversity: 39.26

MFE Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((.(((((..(((...((((((((............((((((...))))))..(((((........))))).))))))))..)))..))))).((((.((.(((((..........))))).))))))....(((((((((((...((((.....))))..)).))))))))).((((......)))).........)))..

Thermodynamic Ensemble Prediction

.....(({.(((((..{(({,.((((((({............((((((...))))))..(((((........))))).})))))))..))),.))))).((((.((.(((((.......,.,)))),.}}))))....(((((((((((...((((.....))))..)),})))))))).((((......)))).........)))..

Basic Information

Secondary Structure

Structure Prediction

Forensic Context