Basic Information
Symbol
hsa_ZKSCAN1_0002400
RNA Class
transcript (circRNA)
Alias
hsa-ZKSCAN1_0005
Host gene
ZKSCAN1
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
7:99621042-99628723
UCSC (hg19)
Location (GRCh38)
7:100023419-100031100
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-62.80 kcal/mol
Thermodynamic ensemble
Free Energy:
-69.06 kcal/mol
Frequency:
0.0000
Diversity:
90.05
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
....(((.........((((((((.((...(((((((((((((((((.........))).))))))))).................)))))...))..)))))))).(((.........)))..))).....((((.(((((.((...(((.((..(((((((((((.(.....((((......))))...).)))))..((((...(((((((.((....((((....))))....)))))))))...))))............)))))))).))).)).)))))...))))
Thermodynamic Ensemble Prediction
.,..{((...,,..,.((({{{{{.,{...(((((,{{{{{((((((.,.....||))).}}}}})))).....,,,,,...,},.))))),..||,,|}}}}}}),(({,.,,,,|,,}},..,||...|,({{{.{{(({.{{.,,|{{,{{|,|{{(({(((((.(.....((((......))))...}.)))))..((((...((((((({{(,...((((....))))...,),)))))))..,))))............)))))))),})).)}.}}}))...))))
Forensic Context
No forensic context available.