Forensic RNA Knowledge Base

Basic Information

Symbol

hsa_ZNF609_0006900

RNA Class

transcript (circRNA)

Alias

hsa_circ_0104222 hsa_circZNF609_004 hsa-ZNF609_0012

Host gene

ZNF609

Type of circRNA

Exon-Exon

Location (GRCh37)

15:64915026-64915251 UCSC (hg19)

Location (GRCh38)

15:64622827-64623052 UCSC (hg38)

External Database

circbank

circBase

Secondary Structure

Generated by RNAfold

Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.

Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.

Minimum free energy

-67.60 kcal/mol

Thermodynamic ensemble

Free Energy: -71.62 kcal/mol

Frequency: 0.0015

Diversity: 64.44

MFE Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((..((((((((...(((((.(((((..(((..((((....))))......((((....))))..(((((......)))))((...(((((((.(..(((((....)))))..)))).))))...)).(((((((....)))))))(((.((((.(..((...........))..).)))))))...)))..))))).)).)))..))))))))..))).

Thermodynamic Ensemble Prediction

.....(((..((((((((...(({{(.(((((..(({..((((....))))...,.,((({....})))..(((({......))))}{{,.,({{((((.(.,((({{....,}|)),,|}}}.}}}},..||,(((((((....))))))){{{.||{|,||,|||,.,,,..,,.))..)})))}))}...}))..))))).)),)))..))))))))..))).

Basic Information

Secondary Structure

Structure Prediction

Forensic Context