Forensic RNA Knowledge Base

Basic Information

Symbol

hsa_MACF1_0070100

RNA Class

circRNA

Alias

hsa_circ_0113320 hsa_circMACF1_140 hsa-MACF1_0119

Host gene

MACF1

Type of circRNA

Exon-Exon

Location (GRCh37)

1:39945470-39945681 UCSC (hg19)

Location (GRCh38)

1:39479798-39480009 UCSC (hg38)

External Database

circbank

circBase

Secondary Structure

Generated by RNAfold

Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.

Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.

Minimum free energy

-48.8 kcal/mol

Thermodynamic ensemble

Free Energy: -53.01 kcal/mol

Frequency: 0.0011

Diversity: 38.92

MFE Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((..((((........)))).((........)))))))...((((((..(((.(((((.((((((...........))))))((.(((....))).))))))))))..))))))..(((((...(.(((......))).)...))))).((((.((((.............................))))..)))).......

Thermodynamic Ensemble Prediction

.....(((((..,,,,........||||.{{,....,,.},)))}}.{.((((((..(((.(((((.((((((...........))))))((.(((....))).))))))))))..)))))),,{((((...{.(((......))).}...))))).{{{{.((((........,|,............,.....}}))..))))......,

Basic Information

Secondary Structure

Structure Prediction

Forensic Context