Basic Information
Symbol
hsa_PTPRF_0003700
RNA Class
circRNA
Alias
hsa_circ_0012077
hsa_circPTPRF_014
hsa-PTPRF_0011
Host gene
PTPRF
Type of circRNA
Exon-Exon
Location (GRCh37)
1:44054402-44054671
UCSC (hg19)
Location (GRCh38)
1:43588731-43589000
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-100.5 kcal/mol
Thermodynamic ensemble
Free Energy:
-104.32 kcal/mol
Frequency:
0.0020
Diversity:
71.33
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((.((((((((((..((((.......(((...((((((....((((((((..((((.((((..(((((.......))))).((((((.(.((((.(((((...((((.....))))...)))))(((.(..((((((.(..((((.(.((....(((....)))..)).).)))))))))))..)...))))))).).)))))).......)))).)))))))))))).))))))...)))))))))))).))...)))))(.......)
Thermodynamic Ensemble Prediction
((.((((((((((,,((((.......(((...((((((.,..((((((((..((((.((((..(((((.......))))),((((((.(.((((.(((((...((((.....))))...)))))(((.(..((((({.({.,(((.(.((.{..(((....))),.)).).))))}))))))..)...))))))).).)))))}.,.....}})).)))))))))))),))))))...)))))))))))).))...)))))(.......)
Forensic Context
No forensic context available.