Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ABCC1_0019000

Sequence Length

208 nt

GC Content

0.5385

GUCAAGCUUUCCGUGUACUGGGACUACAUGAAGGCCAUCGGACUCUUCAUCUCCUUCCUCAGCAUCUUCCUUUUCAUGUGUAACCAUGUGUCCGCGCUGGCUUCCAACUAUUGGCUCAGCCUCUGGACUGAUGACCCCAUCGUCAACGGGACUCAGGAGCACACGAAAGUCCGGCUGAGCGUCUAUGGAGCCCUGGGCAUUUCACAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-53.3 kcal/mol

Ensemble Metrics

Free Energy: -57.5

Frequency: 0.0011

Diversity: 74.19

Structure Visualization

Structure Prediction

MFE Structure Prediction

((...((.....((((...((((....(((((((((...)).).))))))....))))...))))............))...))(.((((...((.(.((((.(((.......((((((((....(((.((((....)))))))....(((((..(.......)...))))))))))))).....)))))))..).))....)))).)

Thermodynamic Ensemble Prediction

((...{{.....((({.,,((({....(((((((((...}}.}.)))))}....,}}}.||}|,,.........,.{|||..}}(.((((,,,({,{.((({,(((.......((((((((...,(((,((((....)))))))....||||{..||.,....},..)))))))))))))....,)))))))..),)).,..)))).)