Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ACAP2_0013900

Sequence Length

384 nt

GC Content

0.3646

AUCCUGUUUGACCAAACUCAGAGAUCAAUUAAGGCACAGCUUCAGAACUUUGUUAAAGAAGAUCUUAGAAAAUUCAAAGAUGCCAAGAAGCAAUUCGAAAAAGUCAGUGAAGAAAAAGAAAAUGCGUUAGUAAAAAAUGCCCAAGUACAAAGAAACAAACAACAUGAAGUUGAAGAAGCCACCAACAUUCUGACAGCAACAAGAAAAUGUUUCCGACACAUAGCCCUCGAUUAUGUGCUUCAGAUUAAUGUUCUUCAAUCAAAAAGGAGAUCAGAAAUCCUAAAAUCAAUGUUGUCAUUUAUGUAUGCCCAUUUGGCCUUCUUUCAUCAAGGAUAUGAUCUGUUUAGUGAACUUGGACCCUACAUGAAGGAUCUUGGUGCACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-63.9 kcal/mol

Ensemble Metrics

Free Energy: -72.22

Frequency: 0.0000

Diversity: 122.39

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((..(......)..))).)))(.........((((..(((...(((((..(((((((.((((......((((..(((.....(((....)))......)))..))))....))))....(((((.......)))))....(((((.(((.....(((((((((.((((((((........(((((((((.(((((((......))))......(((((((....).))))))))))))))...)))))))))))).....((((.........))))....)).)))))))..))).)))))(((.....))))))))))...)))))...))).))))...(((.(((.(((.(((......))).))).))).))).)

Thermodynamic Ensemble Prediction

((((((..(......,..))).}}}(.......,.((((..(((...(((((,.{{{(({{{((((.{{....|}.}}}}|{{,,,{,,||..|||......,}|..}}},......,.....(((((.......))))),,,,((,({...{,,,..{(((({({,.{{(((((({,,,,.,,{{{{{{((({((((,{,.,....}}}}...,.(((((((,....}.)))))))},}},||{{..||,|||||,,,.....,|||},.,,..,,))},....,,..)))))),,,,,,))),}||....,))))))))))}.,.))))}...))).}))),,.{||.|||,||{.{({......))).)}}.})}.}}),)