Sequence Details

BLAST PRIMER
Symbol
hsa_AMOTL1_0004300
Sequence Length
487 nt
GC Content
0.5503
ACAAAGAAUUCUUGAAGGAAAAGGAGAAAUUAGAAAUGGAGUUAGCAGCAGUGCGGACUGCAAGUGAGGACCAUCGGAGACACAUCGAGAUCCUGGACCAGGCUUUGAGCAACGCCCAGGCCAGGGUCAUCAAGCUGGAAGAGGAGUUACGAGAGAAGCAAGCAUAUGUUGAGAAAGUUGAGAAGCUGCAGCAGGCCCUGACCCAGCUGCAGUCUGCAUGUGAGAAGCGAGAACAGAUGGAGCGGAGACUGCGGACUUGGCUGGAGAGAGAGCUGGAUGCACUGAGAACCCAGCAGAAACAUGGAAAUGGCCAGCCAGCCAACAUGCCGGAAUACAAUGCCCCAGCCCUCCUGGAACUUGUGCGGGAGAAGGAGGAGCGGAUCCUGGCCCUGGAGGCCGACAUGACAAAGUGGGAGCAGAAGUACCUGGAGGAGAGCACCAUCCGACACUUUGCCAUGAAUGCCGCAGCCACUGCAGCAGCUGAGAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-140.1 kcal/mol
Ensemble Metrics
Free Energy: -149.83
Frequency: 0.0000
Diversity: 155.96
Structure Visualization
Structure Prediction
MFE Structure Prediction
........(((((........))))).............((((.((.(((((..((.((((((((..((.(((..(((............)))))).))..))))..........(((((((((((((....((((........)))).........((...(((((((.(.............((((((((.((.......)).))))))))).)))))))....)).........(((.(((.....(.(((..((((((((.......(((((.............))))).......(((......))).))))))))....))).)......))).)))((((((((....((.....))....)))))).)).)))))))).))))).(((...((((.(((((((((.((....)).))((((((......)).)))).))))))).))))...)))))))))))))).)))))).....
Thermodynamic Ensemble Prediction
........(((((........}}))}...,,........{{((.((.(({((({(({((((,.{(,,,,.{{.|,{{,......,}||{{||||{|.||.{((,,........}}|,,||||||||||.,,.{(((((...{({.{{{.,......,||..,{...{{{{{....,{{{....,}}|,||||.||}}}}...))})))))))}||}}}}||.....||.....,...{{..({(,.,.|{|(((.,{(((((((.......(((((...,.....,...))))).....{{(,,..,}}.))),)))}})},,,.||||,.......|||.||,|{{((((({...,,..,.})))}}.,))})).)),}}))))))}|.)),.|||...((((.(((((((((.((....)).)){(((((......)).)))}.))))))).))))...})))))),),)))).)))))),....
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