Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ANKRD12_0008100

Sequence Length

417 nt

GC Content

0.3909

AUUCAGAUCCAGGACAUACAAGUGAAAAUUGGGGGGAGAGACUUAUAUCUUCUUACAGGACAUACUCAGAGAAAGAAGGUCCAGAAAAGAAGAAGACAAAAAAGGAAGCUGGAAAUAAGAAAUCCACACCAGUUAGCAUUCUUUUUGGUUAUCCACUCUCUGAGCGAAAACAGAUGGCACUUCUUAUGCAGAUGACAGCAAGAGACAACAGUCCAGAUUCCACACCAAAUCAUCCAUCACAAACAACGCCUGCCCAAAAGAAAACUCCCAGUUCUUCAUCUCGACAGAAAGAUAAAGUUAAUAAAAGAAAUGAACGUGGUGAAACUCCUUUACACAUGGCUGCUAUUCGAGGAGAUGUGAAACAAGUUAAAGAAUUAAUAAGUUUAGGGGCAAAUGUGAAUGUGAAAGAUUUUGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-71.5 kcal/mol

Ensemble Metrics

Free Energy: -80.63

Frequency: 0.0000

Diversity: 114.51

Structure Visualization

Structure Prediction

MFE Structure Prediction

..(((((....(((.(..((((((..((((((..(((....(((((.(((((((...((((...((.......))...))))....))))))).........((....))....)))))...)))...))))))..))).....)))..).)))....)))))(((((......(((.(((((((.(((........))).))))....))))))((((........))))(((..(((((....(((..(((((......(((((...(((((((((((((....(((......(((................(((((((((.....))))).)))))))....)))...))))))............)))))))....)))))..)))))..)))...)))))..))))))))..

Thermodynamic Ensemble Prediction

..,,,{({(..({{(......{{{....|((,,((((((........)))))),.}}|,.,...((((((((..{...,.(((({{{{((({..{{{......({,.,(({{.....,,...}}}...}},)))..}.))))))))))...},...))))))))..........{{{.{{{((((.(((........))).))))....,)))).||||......,,||,,{({..(((((..,.{((..(((((....,.,,{{(...{{{(({{((((((....{,,.,.....,,.............,..|{{||{{{(.....}))}}.}|}}.||.||.,}}.,,)))))),,{{{,..{{{,|,,,,)),,,.,))))..)))))..)))}..)))))..)))}))}...