Sequence Details

BLAST PRIMER
Symbol
hsa_ATXN10_0008900
Sequence Length
279 nt
GC Content
0.4480
GAGGCACUGGCUACAAUUAGGCUUCUCGACGUCCUGUGCGAAAUGACUGUGAAUACUGAGCUGCUCGGCUAUCUGCAGGUUUUCCCUGGCUUGCUGGAAAGAGUGAUUGAUCUUUUGCGGGUGAUUCAUGUAGCUGGAAAAGAAACCACAAACAUCUUCAGUAAUUGUGGUUGCGUGAGAGCAGAAGGUGACAUCUCCAAUGUGGCCAAUGGGUUUAAGUCUCAUCUCAUUCGUCUGAUUGGAAAUCUGUGUUACAAGAAUAAAGAUAACCAAGACAAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-63.5 kcal/mol
Ensemble Metrics
Free Energy: -70.06
Frequency: 0.0000
Diversity: 88.75
Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((.((((......)))))))))(((((.....)).)))..............(((((...)))))...((((((((((......))))))).)))..((((((....((((((.(((.((.......)).))).))))))((((((((((.......))..))))))))((......))....(((.((((.....)))).))).(((((.......))))).))))))((((...(((..((((.((((.....)))).))))..)))))))...
Thermodynamic Ensemble Prediction
(((((.((({......,))))))))(,,,{{{{..|,,||{,,,{{{,{{{,,,{(((((,,.}|}}},|||{{((((({{......})}}}}).}||.,{{||,,....{(((((.({{.{{......,)).))).}}}))}{(((((((,{.......)}..)))))))}{|.,..,.))},..(((.((({.....}))).))).{{{{{,......})))),))))}}||{{..,(((..((((.((((.....)))).))))..)))))))..)
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