Sequence Details

BLAST PRIMER
Symbol
hsa_CASC4_0001500
Sequence Length
475 nt
GC Content
0.3789
GUUAAACUACAGAACAACAUAUCGUAUCAGAUGGCAGACAUACAUCAUUUAAAGGAGCAACUUGCUGAGCUUCGUCAGGAAUUUCUUCGACAAGAAGACCAGCUUCAGGACUAUAGGAAGAACAAUACUUACCUUGUGAAGAGGUUAGAAUAUGAAAGUUUUCAGUGUGGACAGCAGAUGAAGGAAUUGAGAGCACAGCAUGAAGAAAAUAUUAAAAAGUUAGCAGACCAGUUUUUAGAGGAACAAAAGCAAGAGACCCAAAAGAUUCAAUCAAAUGAUGGAAAGGAAUUGGAUAUAAACAAUCAAGUAGUACCUAAAAAUAUUCCAAAAGUAGCUGAGAAUGUUGCAGAUAAGAAUGAAGAACCCUCAAGCAAUCAUAUUCCACAUGGGAAAGAACAAAUCAAAAGAGGUGGUGAUGCAGGGAUGCCUGGAAUAGAAGAGAAUGACCUAGCAAAAGUUGAUGAUCUUCCCCCUG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-75.7 kcal/mol
Ensemble Metrics
Free Energy: -85.1
Frequency: 0.0000
Diversity: 134.99
Structure Visualization
Structure Prediction
MFE Structure Prediction
.........(((........(((......)))((((........((((((......(((((...((.((((.(....(((((.(((((.....)))))........((((((((..((.........((.(((((.....))))).))..((((...(((((((((.....((.....)).....)))))))))....))))................(((....)))..((((((........)))))).......((((....(((.(((....))).))).....))))..........))..))))).)))......)))))....).)))).))...)))))......))))))....((((...(((.((((.((((.....))))....((..((....))..))))))))))))).)))).......(((((..((.(.((......)).).))..)))))...)))
Thermodynamic Ensemble Prediction
{{.......{,{........,{{.,....|||(,,,..,.,.|,((((({......(((((...((.((((.(.,..(((({.(((((.....))))}....,,{.((((((((..({.........((.(((((.....))))).)).,{{{,...{((((((((.,...{{.....}}.....))))))))).,..},}},,,.......,.....{{|....,,}..((((({....,...,,,}}}.......{{{,....(((.{((....))).))}..,.,|||}.......,..))..))))).)))......}))))....}.)))).))...)))))......}}}))}....{{({...{{,,{({{.{(((....,))),....{{..((....}}.,))))))))}}})}.,})}.|{....(((((..((.{.{{......}).).))..)))))..,)))
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