Sequence Details

BLAST PRIMER
Symbol
hsa_CD44_0010000
Sequence Length
324 nt
GC Content
0.4722
CAGCCUCAGCUCAUACCAGCCAUCCAAUGCAAGGAAGGACAACACCAAGCCCAGAGGACAGUUCCUGGACUGAUUUCUUCAACCCAAUCUCACACCCCAUGGGACGAGGUCAUCAAGCAGGAAGAAGGAUGGAUAUGGACUCCAGUCAUAGUAUAACGCUUCAGCCUACUGCAAAUCCAAACACAGGUUUGGUGGAAGAUUUGGACAGGACAGGACCUCUUUCAAUGACAACGCAGCAGAGUAAUUCUCAGAGCUUCUCUACAUCACAUGAAGGCUUGGAAGAAGAUAAAGACCAUCCAACAACUUCUACUCUGACAUCAAGCA

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-64.7 kcal/mol
Ensemble Metrics
Free Energy: -70.49
Frequency: 0.0001
Diversity: 90.73
Structure Visualization
Structure Prediction
MFE Structure Prediction
...((((.(((........((.(((.......))).)).........)))...))))....((((((...((((..((((..((((.............))))..))))..))))..))))))((((((.((...((...(((.(((..(((....((((..(((((.................))))).))))....)))..))).)))))...)))))))).............(((((((......((((...)))).........((((..(((((.(...........).)))))...)))))))))))..........
Thermodynamic Ensemble Prediction
..{((((.(((.......,((.(((.......))).)).........)))...)))).,..{(((((...((((..((((..((((.............))))..))))..))))..)))))}((((({,((.,.({,,{{,,.|||..|{{....,,||||,{|{|.|||{....{{{{{{...,))))))|||||||,},|},},}..)},..)))))))),........,,,|({((({,..,|||,((({{,|||,.........}}})}))}|}||{{{{..........}}}.....)))))})))))..........
Back