Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_DENND2A_0006300

Sequence Length

250 nt

GC Content

0.4960

AAAGUCCUAUGAGUUUGAAGAUUUACUGCAGUCUUCCUCUGAGAGCAGCAGGGUGGACUGGUACGCGCAGACUAAGCUGGGGCUGACACGCACUUUAUCGGAGGAGAACGUCUAUGAAGACAUUCUAGAUCCGCCAAUGAAGGAGAACCCUUAUGAGGACAUCGAGUUACAUGGUCGCUGCCUGGGAAAGAAGUGUGUCUUGAAUUUUCCUGCUUCUCCCACCUCUUCCAUCCCUGACACACUCACCAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-59.4 kcal/mol

Ensemble Metrics

Free Energy: -64.11

Frequency: 0.0005

Diversity: 66.27

Structure Visualization

Structure Prediction

MFE Structure Prediction

......((.(((((.((........((((..((.......))..))))(((((((((..(((..(.(.(((...(((.((((..(((((((.((((((((((..((((.((((....)))).))))...))))...)))))).....(((.....(((.((.(((.(.....).))).))))))))......))))))).......)))).)))))))).)))...)))).))))).)).)))))...))

Thermodynamic Ensemble Prediction

......{{.{((((.{(,,,,,...{{{{.,||,,,....|},.})}}(((((((((..(((..{,{{((,...{{{.|{|{|,{{{{{||.(((((({(({,,((((.((((....)))).))))...)))},,.)))))),.....|||,...(((.((.(((.(.....).))).)))))|||,..|,,||}}}}}........,)},)))))))}})))...)))).))))).}}.}))))...})