Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_DENND4C_0001300

Sequence Length

322 nt

GC Content

0.4099

AAAAUACAGUAGCAGCCAUGAUAGAAGACAAAGGACCAAGAGUGACAGACUACUUUGUCGUAGCUGGUCUCACUGACACAUCUACUCUUUUGGAUCAAGAAAUAAAUCGUUUAGAUACUAAGUCAACUGGACCUAAAGCUCCAAUUACAGACAUUGCCAUUAUUAUCAAAUCAGCUGGAGAAACAGUACCUGAAGGUUACACCUGUGUAGAAGCCACUCCAUCAGCUCUCCAAGCAAACUUGAACUAUGGAAGUCUGAAAAGCCCAGAACUUUUCCUCUGUUAUAAGAGAGGGAGAGAUAAACCACCGCUUACAGAUAUUGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-61.8 kcal/mol

Ensemble Metrics

Free Energy: -69.47

Frequency: 0.0000

Diversity: 66.04

Structure Visualization

Structure Prediction

MFE Structure Prediction

......(((((..(((..((......(((..(((((((((((.((((((....))))))((((.(((((.....))).)).)))).))))))).)).........(((.....))).))..)))...((((........))))....(((((.((.((((.....((((....((((((((........((((.(((((((....)))))........)).)))).))))).)))....))))...)))))))))))............((((((((((........))))))))))......))..)))......))))).

Thermodynamic Ensemble Prediction

..,,,,(,(((,{,{{..{{......,,,...,({(((((((.((((({....))))))((((.(((((.....))).)).)))).))))))).}}.........,||.,,..|||.,,..}}}...((((......|.)))}.,,.(((((.{{.((((.....((((....((((((((....{,,,({{,.||{,||,.||{||,||......,,,}.,}}).))))),,))....))))...))))}})))))............((((((((((........))))))))))..........))),,}.}.))))}.