Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_DENND4C_0026000

Sequence Length

364 nt

GC Content

0.4093

GAUCCUUUAGGAAAAAGACCCAAUCCUCCCCCUGUUUCUGUGCCCUACUUGAGUCCUCUAGUACUCCGUAAAGAACUUGAAUCUUUGCUAGAAAAUGAAGGUGAUCAGGUGAUUCAUACAUCUUCUUUCAUCAAUCAACAUCCAAUCAUUUUCUGGAACCUCGUUUGGUAUUUCAGACGUUUGGACCUUCCUAGUAACUUGCCAGGACUUAUCCUCACAUCUGAACAUUGUAAUGAAGGUGUACAGCUUCCUCUGUCAUCUCUGUCCCAGGAUAGCAAACUUGUGUAUAUUCAGCUGUUAUGGGAUAAUAUCAACCUUCAUCAGGAACCAAGAGAACCUCUGUAUGUCUCAUGGAGGAAUUUUA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-79.7 kcal/mol

Ensemble Metrics

Free Energy: -86.59

Frequency: 0.0000

Diversity: 90.62

Structure Visualization

Structure Prediction

MFE Structure Prediction

.......((((....(((..((..........))..)))....))))...((((........)))).(((((((.......)))))))((((((((((.((((((..(((((...............))))).))))....))..))))))))))..(((......)))..((((((.((..(((...((((.(((...))).))))....)))..)).))))))...........(((((.((((......))))))))).(((((((.((((((.................)))))).))))))).......(((((((.(((.....((((...)))).....))).))))))).......

Thermodynamic Ensemble Prediction

..(((....||}...,{,.....{{{{{{...,({{({((.....,{,..(({{..,,.,},)}}}.(((((((.......))))))){{{{{{((((,((((({.,(((((......,,,,,....}})}}.}},,...|||..}}}}}})}))},(((......)))..{(((((.((..(((...((((.(({...})).))))....)))..)).)))))).......|{||{(((|.((((......)))))},,,.(((((((.((((((.................)))))).)))))))......}))))))}})))}}}..,(((,.,,,,,....,)))}.,))))))..,,,.