Sequence Details

BLAST PRIMER
Symbol
hsa_DNAJC6_0012300
Sequence Length
407 nt
GC Content
0.5381
GUAGUUCUUCCUUUGCCAGCAAACCCACCACACCAACUGGAUUGGGUGGAGGAUUCCCGCCUCUCAGCUCGCCACAGAAGGCGUCUCCCCAGCCUAUGGGUGGCGGGUGGCAGCAGGGAGGUGCCUACAACUGGCAGCAGCCACAGCCUAAGCCUCAGCCCAGCAUGCCCCACUCCUCUCCCCAGAACCGACCCAACUACAACGUGAGCUUCUCAGCCAUGCCUGGGGGCCAGAACGAACGUGGGAAAGGAUCAAGUAAUUUGGAAGGGAAACAAAAAGCAGCUGAUUUUGAAGACCUACUCUCUGGUCAAGGUUUCAAUGCUCACAAAGACAAAAAGGGGCCUCGGACAAUAGCUGAGAUGAGAAAGGAGGAAAUGGCCAAGGAAAUGGAUCCUGAGAAAUUAAAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-118.2 kcal/mol
Ensemble Metrics
Free Energy: -125.6
Frequency: 0.0000
Diversity: 118.76
Structure Visualization
Structure Prediction
MFE Structure Prediction
(..((((((((((.((((......((.((((.((((.....)))))))).))....((.((((((((((((((((...((((.........))))....)))))))))(((....((..(.((((.......)))).)..))...))).....((((((((((...(((((..((((.((((..((.((..((((.........((.(((((.(((......)))))))))).........))))...)).))..)......))).)))).......((((...((((((...((((........))))))))))....))))..............))))))).))......)))))).)))))..)).))...)))).))))))..)))))((..........))
Thermodynamic Ensemble Prediction
(..{(((((((((.((((......((.((((.((({.....}))))))).)).,{,({.({((((((((((((((...((((.........)))).,..)))))))))(((,{,.((,.(.({{(.......|||}.}.,))...}}}...,,((({{{{{,|,.,(((((..((((.((({.,({.((..((({........,((.(({{({(((,...,.))))))))}}....,...,))))...)).))..|...,,,))}.)))}.......{{{{..|{{||{{,..{{((........)))),}}}}},,,.})))..............)))))||,}}......)))))).})))}..)).)),,.)))).)))))}..}}}})((..........))
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