Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_DYM_0007700

Sequence Length

514 nt

GC Content

0.3911

AUAGCAGUCCUUUCCCCUCAUCAAUUCCACAUGCCUUCCAGAUCAACUUUAAUAGUUUGUACACAGCUCUUUGUGAACAGCAGACAUCUGAUCAAGCAACUCUCCUCUUGUAUACCUUGCUCCAUCAAAAUAGUAAUAUUAGAACAUACAUGUUGGCUCGCACAGAUAUGGAAAAUCUUGUUUUACCAAUUCUUGAGAUUCUGUAUCAUGUUGAAGAAAGGAAUUCACACCAUGUGUAUAUGGCCCUUAUAAUAUUGUUGAUCCUUACGGAAGAUGAUGGCUUCAACAGAUCCAUUCAUGAAGUGAUACUAAAAAAUAUUACUUGGUAUUCAGAACGAGUUUUAACUGAAAUCUCCUUGGGGAGUCUCCUGAUCCUGGUGGUAAUAAGAACCAUUCAAUACAACAUGACUAGGACACGAGACAAGUACCUUCACACAAAUUGUUUGGCAGCUUUAGCAAAUAUGUCGGCACAGUUUCGUUCUCUCCAUCAGUAUGCUGCCCAGAGGAUCAUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-95.7 kcal/mol

Ensemble Metrics

Free Energy: -108.25

Frequency: 0.0000

Diversity: 160.12

Structure Visualization

Structure Prediction

MFE Structure Prediction

((....))(...(((((.................(((((.(((((((..((...((((((.(((((....)))))....))))))...((((..(((((.................)))))..)))).((((....))))..((((....))))((((.((((((((((((((..((..(...........)..))..))))))))).(((.(((........))))))...)))))....)))).......))..))))))).....)))))(((((((..((....)).))).)))).((((((((........))))))))(((.(((((............)))))))).....)))))(((((.((.(((((((.((......................)).))))))))).)))))..............(((((((((((((.............)))))).))))))).(((((((....(((....)))...))))))).....)

Thermodynamic Ensemble Prediction

,,....,(((({((,{{.........,..,,,{.{{{{(,(((((((..,,..,((((((.((((,....,)))).,,,}}}}}}...((((..(((((..........,......)))))..)))).,,,{....}}}}..,,,,..,,})}}|||{,{,({((((((((((..((,,{..,....,...,.,))},))))))))).})}|||,},},}},.}}}},,{{,||}}}.}}})),.....,..}},,|}|||||{{,..||}}}{{(((((,,((,...||.}}}.))}),|||{((((,,,.....}}}}}}))|}},||{{(,,,{{,,.,...}}}}},,}||,..}})))(((((.((.(((((((,((.......,....,,........}).))))))))).)))))..,,........,.,{{{(((((((((,,....,,.....)))))).))))))),}}}}},,,},,||,...,))}}}.,))))))},.,,}