Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FNDC3B_0015000

Sequence Length

585 nt

GC Content

0.4957

GUGAUUGAAGAUAGUACUGGAGUCCGCCGGGUGGUGGUCACACCCCAGUCUCCUGAGUGUUAUCCCCCAAGCUACCCCUCAGCCAUGUCUCCAACCCAUCAUCUCCCUCCCUAUCUGACUCACCAUCCACAUUUUAUUCAUAACUCACACACGGCUUACUACCCACCUGUUACCGGACCUGGAGAUAUGCCGCCUCAGUUUUUUCCCCAGCAUCAUCUUCCCCACACAAUAUAUGGUGAGCAAGAAAUUAUACCAUUUUAUGGAAUGUCAACCUACAUCACCCGAGAAGACCAGUACAGCAAGCCUCCGCACAAAAAACUGAAAGACCGCCAGAUCGAUCGCCAGAACCGCCUCAACAGCCCUCCUUCUUCUAUCUACAAAAGCAGCUGCACAACAGUAUACAAUGGCUAUGGGAAGGGCCAUAGUGGUGGAAGUGGCGGAGGCGGCAGCGGUAGUGGUCCCGGAAUUAAGAAAACAGAGCGACGAGCAAGAAGCAGCCCAAAGUCGAAUGAUUCAGACUUGCAAGAAUAUGAGUUGGAAGUAAAGAGGGUGCAAGACAUUCUUUCGGGAAUAGAGAAACCACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-130.6 kcal/mol

Ensemble Metrics

Free Energy: -144.23

Frequency: 0.0000

Diversity: 173.02

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.(.(((.(((((...((((.((..((..((.((.(((.((((..(((....))).)))).)))))))..)).))...))))...))))).)))))(....((((..((((.....((.((..(((((...(((((((..(((((((.....((((..........(((((.(((((((........(((((((((.((((((((....((.(((((.................)))))))...........((((...)))).((((......)))).....))))))))((((.......((....)).......))))...((.(....).))...(((((...(((((......((((((((....((((...........((((.....)))).....))))....))).)))))......)))))...))))))))))))))........))).)))).........))))).((..(......)..))))))..((((((((...))).))))).........)))))))..))))))).)))))...))...))....))))...)))).......)

Thermodynamic Ensemble Prediction

(((,{((.{((((,..{((({(...{{.{(({((,({,.{{||,.{({....)}).)))).}}),,,}..}}}}}|,,,}})...}}}}}.}}}}||.,,.{{{{,.((,{,,|{{{{,{{|.{,{{,...,{{{{(({.{({(((,....{(((.,,{,..{,,.{{{{..,}}}...}))}}.}},||||{(((.(((((((.....{(.(((((.................))))})}..|,.......((({...}))).{{({......})}}...(((.{..(((((.(((.((..((((((((,{......{{(...((.(,...,..)}.}},.||}..(((((.{....((((((((....((((...........((((.....)))).....})))....)))}}))))....}.)))))..,))))))))))....)).))).)))))}))).....,)))))).))),}.,..||.....}}.||...((((({{,...,)}.)))))},..,....))))))))}}},}}}}|)))}}..,}},,,}}},..)))}...)))}.......)