Sequence Details

BLAST PRIMER
Symbol
hsa_FOXP1_0005800
Sequence Length
464 nt
GC Content
0.5129
CAACAGCAGGUGGCUACCCAGCAGUUGGCUUUUCAGCAGCAGCUUUUACAGAUGCAGCAGUUACAGCAGCAGCACCUCCUGUCUUUGCAGCGCCAAGGCCUUCUGACAAUUCAGCCCGGGCAGCCUGCCCUUCCCCUUCAACCUCUUGCUCAAGGCAUGAUUCCAACAGAACUGCAGCAGCUCUGGAAAGAAGUGACAAGUGCUCAUACUGCAGAAGAAACCACAGGCAACAAUCACAGCAGUUUGGAUCUGACCACGACAUGUGUCUCCUCCUCUGCACCUUCCAAGACCUCCUUAAUAAUGAACCCACAUGCCUCUACCAAUGGACAGCUCUCAGUCCACACUCCCAAAAGGGAAAGUUUGUCCCAUGAGGAGCACCCCCAUAGCCAUCCUCUCUAUGGACAUGGUGUAUGCAAGUGGCCAGGCUGUGAAGCAGUGUGCGAAGAUUUCCAAUCAUUUCUAAA

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-112.7 kcal/mol
Ensemble Metrics
Free Energy: -122.5
Frequency: 0.0000
Diversity: 114.26
Structure Visualization
Structure Prediction
MFE Structure Prediction
.........(.((((......(((..((((((...((.((.((....((((.(((.((.((....)).)).)))....))))....)).)))).))))))..))).......)))))(((((...))))).............((.((((...)))).))......((((.(((...))).))))...((((((((.((((.((((((((((.........(((((.(..........((((...(((...(((.((.....)))))...))).))))............................((((.(((...(((((.(((((........)))))...((((....)))).....(((((...(((((((.........))..))))).....))))))))))...))).))))...).)))))..))))))))...))))))....))))))))...
Thermodynamic Ensemble Prediction
...,,(,{(({((((.....,(((..((((((...((.((,({....{{((.{((.((.({....)).)).))}..,.})))..,,)).))}|.})))))..))).......)))).(((({...}))))............,{{.{(({...})}}.}},,,...,{{{,((({.{|||{,||||..,,,,((((...,({({,,,,{{{{.........,.|||}|,....}}}}.((((...(((...(({{((....,)))))...))).))))........,{.....,,,......,...((((.(((.,.(((((.{((((........))))}...((((....))))..,..(((((...(((((((.........))..))))).....))))))))))...))).))))}}}))))))}..)))))})).|,,|||,....,))}}}))}...
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