Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_HECW2_0006200

Sequence Length

335 nt

GC Content

0.5075

GCAUUCUUUGUGGACCACAACUCCCGCACCACCACUUUCAUUGAUCCCCGGCUCCCACUUCAGAGCAGUAGACCCACAAGUGCGCUGGUUCAUCGGCAACACCUGACAAGGCAACGCAGCCACAGUGCGGGUGAGGUAGGAGAAGAUUCUCGACAUGCAGGACCACCAGUUCUUCCCAGGCCAUCCAGUACAUUCAAUACAGUCAGUAGGCCACAGUACCAGGACAUGGUUCCAGUGGCUUACAAUGACAAGAUUGUUGCAUUUCUACGUCAACCCAAUAUCUUUGAAAUUCUACAGGAGCGUCAACCUGAUCUUACCAGGAAUCACUCACUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-74.9 kcal/mol

Ensemble Metrics

Free Energy: -82.54

Frequency: 0.0000

Diversity: 95.83

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.(((((.(((((........(((((((.....................((((........))))..........((.(((.((((......))))..))).))....(((......)))...)))))))(((.((((((((....))))...((((((((...((...........))...)))........((((...(((((((((((((...((((.....))))....)))))))))..))))...)))).)))))..)))).)))...(((.....)))....)))))))))).))(..((((.......)))).............)

Thermodynamic Ensemble Prediction

(,.{{({{{(((({........{{(((((...,,.,,.....{.{,..,.((((........)))).,..},.....}}|||.|{|||.,..||||}....}||},...(((......)))...))))|||(((.((((((((....))))...,{({{(((,..,,.},,,,.....||...,}}.|,,....(({{...(((((((((((((.,.((((.....))))....)))))))))..))))...}})).})}}}..)))).))}.,.|,,.....}}),...}}}}}}}|}}.}},..{(((.......}))).....,},..,.})