Sequence Details

BLAST PRIMER
Symbol
hsa_HIF1A_0003000
Sequence Length
231 nt
GC Content
0.3550
GUGAUUUGGAUAUUGAAGAUGACAUGAAAGCACAGAUGAAUUGCUUUUAUUUGAAAGCCUUGGAUGGUUUUGUUAUGGUUCUCACAGAUGAUGGUGACAUGAUUUACAUUUCUGAUAAUGUGAACAAAUACAUGGGAUUAACUCAGUUUGAACUAACUGGACACAGUGUGUUUGAUUUUACUCAUCCAUGUGACCAUGAGGAAAUGAGAGAAAUGCUUACACACAGAAAUG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-47.4 kcal/mol
Ensemble Metrics
Free Energy: -51.89
Frequency: 0.0007
Diversity: 70.86
Structure Visualization
Structure Prediction
MFE Structure Prediction
((.((.(((((....(((((...(((((((((.........)))))))))...((((((......))))))(((((.(((.((...)).))).)))))....((((((((......))))))))(((((((((.(..((....(((((......)))))))..).))))))))))))))....))))).)).))(((.......((.(((.....))).)).......)))
Thermodynamic Ensemble Prediction
((.((,({{{,....,||||.,,(((((((((.........)))))))))...{(((((......)))))|{((((.(((,((,..,,.}||,||}|}|,,.{(((((((......)))))))}{{{{{(({(,(,.....,||{{{(.,.,,.}||||}...),))}})))))}}}}}...,})))),)).))|||.,.....||}|||.....))).)}..,....}))
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