Sequence Details

BLAST PRIMER
Symbol
hsa_HIF1A_0004800
Sequence Length
316 nt
GC Content
0.4114
GCCUUGUGAAAAAGGGUAAAGAACAAAACACACAGCGAAGCUUUUUUCUCAGAAUGAAGUGUACCCUAACUAGCCGAGGAAGAACUAUGAACAUAAAGUCUGCAACAUGGAAGGUAUUGCACUGCACAGGCCACAUUCACGUAUAUGAUACCAACAGUAACCAACCUCAGUGUGGGUAUAAGAAACCACCUAUGACCUGCUUGGUGCUGAUUUGUGAACCCAUUCCUCACCCAUCAAAUAUUGAAAUUCCUUUAGAUAGCAAGACUUUCCUCAGUCGACACAGCCUGGAUAUGAAAUUUUCUUAUUGUGAUGAAAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-49.4 kcal/mol
Ensemble Metrics
Free Energy: -57.72
Frequency: 0.0000
Diversity: 119.49
Structure Visualization
Structure Prediction
MFE Structure Prediction
((..((((....((((((.....................(((((.(((...))).))))).)))))).....((.((((((...............(((((((......(((((.(((((((((..((((...(((....((.....(((((.(((.(..........).))).))))).....)).....))).))))..))))))((((..((((.........))))..))))........))).))))).....)).))))))))))).))...))))))((........(((......)))........))
Thermodynamic Ensemble Prediction
(({{((((....{(({(.............,...,,,..|}{{{|{||,{,,,,,|||||,}}}}}}.,||..{,({({,{,..,,..........|||||{{....,||{{{||.{{{{|{{,,,||||,{...{,,,.{{,,.,,{{{{,.,(({(.,{{{{...{{,,{(((||........,.}}},})}.,))).}))))))||,,..((((.........))))..||||,,,,..|||||,}}|||,,...}},,||||}}}}}},}}}..,,,.},||}}|...,,,,,,,},.}))).)))})..})
Back