Sequence Details

BLAST PRIMER
Symbol
hsa_HIF1A_0006100
Sequence Length
255 nt
GC Content
0.3922
AAUUACCGAAUUGAUGGGAUAUGAGCCAGAAGAACUUUUAGGCCGCUCAAUUUAUGAAUAUUAUCAUGCUUUGGACUCUGAUCAUCUGACCAAAACUCAUCAUGAUAUGUUUACUAAAGGACAAGUCACCACAGGACAGUACAGGAUGCUUGCCAAAAGAGGUGGAUAUGUCUGGGUUGAAACUCAAGCAACUGUCAUAUAUAACACCAAGAAUUCUCAACCACAGUGCAUUGUAUGUGUGAAUUACGUUGUGAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-45.1 kcal/mol
Ensemble Metrics
Free Energy: -50.87
Frequency: 0.0001
Diversity: 81.27
Structure Visualization
Structure Prediction
MFE Structure Prediction
((((.......(((((((...((.(.((((.((....(((((..(.((((..(((((......)))))..)))).)))))))).)))).)))...)))))))((((.(((((......))))).)))).....((..((((.....))))..))......((((.((((((...(((((.........)))))...))))))..))))...))))((((..((((((((...)))).))))..........))))
Thermodynamic Ensemble Prediction
{{((,{{.,..(((((((...((.(.((((.((....(((({..{.{(((..(((((......)))))..)))).,})))))).)))).))).,.))))))),((({((((({{{...((.(((({|,((.,.,....,,...)).,)))))))......||||}||||||},.|||{|...{{{..,||||}.{{||||||,.||}}...,}}}{{{,...,,,||{,.,,})))))))),.....))}}))))
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