Sequence Details

BLAST PRIMER
Symbol
hsa_HOMER1_0004600
Sequence Length
289 nt
GC Content
0.4221
GGAACAACCUAUCUUCAGCACUCGAGCUCAUGUCUUCCAAAUUGACCCAAACACAAAGAAGAACUGGGUACCCACCAGCAAGCAUGCAGUUACUGUGUCUUAUUUCUAUGACAGCACAAGAAAUGUGUAUAGGAUAAUCAGUUUAGAUGGCUCAAAGGCAAUAAUAAAUAGUACCAUCACCCCAAACAUGACAUUUACUAAAACAUCUCAGAAGUUUGGCCAGUGGGCUGAUAGCCGGGCAAACACCGUUUAUGGAUUGGGAUUCUCCUCUGAGCAUCAUCUUUCGAAA

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-50.6 kcal/mol
Ensemble Metrics
Free Energy: -57.1
Frequency: 0.0000
Diversity: 69.97
Structure Visualization
Structure Prediction
MFE Structure Prediction
((.....))(.((....((((...(((((((((...........(((((...............)))))............))))).))))...)))).....((((((....(((((.....)))))))))))..........((((((((((.(((....(((...((((.(((((((.((((((.(((................)))...))))))...)))((((...))))((.......))....))))))))..)))..))).)))))..)))))...)).)
Thermodynamic Ensemble Prediction
((.....))(.((....((((...((((((((,(({,......,(((((...........,...)))))........}.}}))))).))))...)))).{{{,{{((((....(((((.....)))))))))))},,.......((((((((((.(((..........,,({.,,,,{{,,((((,(,(((..,.,.........,.,,,,..|||||}{{.,,,((((...))))||.,,,,}.}},.,,)))},)))}},,,..))).)))))..)))))...)).)
Back