Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_IARS_0011100

Sequence Length

229 nt

GC Content

0.4585

UGAUGGCCAAAAAAUGAGCAAACGGAAAAAGAAUUAUCCAGAUCCAGUUUCCAUCAUCCAGAAGUAUGGUGCUGAUGCCCUCAGAUUAUAUCUGAUUAACUCCCCUGUGGUGAGAGCAGAAAACCUCCGCUUUAAAGAAGAGGGUGUGCGGGACGUCCUUAAGGAUGUACUGCUCCCAUGGUACAAUGCCUAUCGCUUCUUAAUCCAGAACGUUCUGAGGCUCCAGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-54.8 kcal/mol

Ensemble Metrics

Free Energy: -60.24

Frequency: 0.0001

Diversity: 59.29

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((((((.....)).))....(((((..(.(((.....))).)..))))).((((((((.(((..((.((....))))((((((...))))))...)))...))).)))))((((.((.....)).)))).........(((...((((.((((((....)))))).)))).)))..((((...)))))))))(((((...((((((....)))).))....)))))

Thermodynamic Ensemble Prediction

(((((((,,....,{{,|,{{{{(((....{,....}}....)}}.}))},|,|||,,{{...,.,}||.||}},,},,,((((({...))))))...,{.{((((.,,,,,{((((.({.....)).)))}}.....},}))}.},((((.{(((((....)))))}.)))).},,..||,....,))),))))(((((...((((((....)))).))....)))))