Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_KIAA1244_0003400

Sequence Length

334 nt

GC Content

0.5958

GAAAAACCUCUGCCCUGCUCUCAUCGUGAUCUUGGGGAAUCCAAUUCAUGACAAAACCAUCACCUCUGCUCACACCAGCAGCACCAGUACCAGCCUGGAGUCGGACUCUGCGUCUCCGGGAGUGUCUGACCACGGCCGAGGAUCAGGCUGCUCCUGCACUGCGCCGGCCCUGAGCGGACCUGUGGCUCGGACUAUCUAUUACAUCGCAGCCGAGCUGGUCCGGCUGGUGGGGUCUGUGGACUCCAUGAAGCCCGUGCUCCAGUCCCUCUACCACCGAGUGCUGCUCUACCCCCCACCCCAGCACCGGGUGGAAGCCAUCAAAAUAAUGAAAGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-111.2 kcal/mol

Ensemble Metrics

Free Energy: -117.7

Frequency: 0.0000

Diversity: 94.19

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.....)((((((...)).....((((((..((((.....)))).))))))..............(((((......)))))..((((.......))))((..((((((.((((...(((((((((((((((........)).)))))).)))))))....)))).).....(((((((((...(((((((.((..............))))))))))))))((((.((((((((....))))))))..))))...)))).)))))..)).(((((..((((((...............))))))..)))))......(((......))).))))

Thermodynamic Ensemble Prediction

(.....)((((,,...||.....((((((..((((,...,)))).))))))..............(((((......))))).,,(((,{{...(((((((,((,....,,||.}}}}|||{|||||||,,{,.{{{{{.||.,|||||.||,,,,)}.}})},}))))),}|,||(((((...(((((((.((..............))))))))))))))||||}||{((({(...,||}}}|||,.,}}}}},)})}})).,,,.{{.(((((..((((((...............))))))..))))).,}...{{{......})}.))))