Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MACF1_0030500

Sequence Length

378 nt

GC Content

0.4206

AAAGUGGUAGAAGAGGAGAAACAAGAACAUGUGGAGAAGGUUAAAGAACUUUUGGGCUGGGUGUCUACCCUAGCGAGGAAUACACAAGGAAAAGCUACCUCAUCCGAGACCAAAGAAUCAACAGACAUUGAAAAAGCUAUUUUGGAACAGCAGGUUCUGUCAGAAGAGCUGACAACAAAGAAAGAACAAGUCUCUGAAGCUAUUAAAACAUCACAGAUCUUCUUGGCCAAGCAUGGUCAUAAGCUCUCAGAAAAAGAGAAGAAACAAAUAUCUGAGCAAUUGAAUGCCCUAAACAAGGCUUACCAUGACCUUUGUGAUGGUUCUGCAAAUCAGCUUCAGCAGCUUCAGAGCCAGUUGGCUCACCAGACAGAACAAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-78.7 kcal/mol

Ensemble Metrics

Free Energy: -86.6

Frequency: 0.0000

Diversity: 82.45

Structure Visualization

Structure Prediction

MFE Structure Prediction

............((((((.........(.((((..(((((((....)))))))..(((((((....)))).)))........)))).)......)).)))).(((((((........((((......))))........))))))).......((((((((.(..((((((((..................((((((((((.......(((((((((.(((..((((((....)))))).)))..((((((...................)))))).........(((........)))...........)))))))))(((..((......))...)))))))))))))...))))))))..).)))))))).....

Thermodynamic Ensemble Prediction

....,{{{.,..{{({{{.........{.({((..(((((((....)))))))..(((((({....})))})))........}}}}.}......)).)))).|{{{{{{........((({......))))........})))}}}.......((((((((.(..((((((((................{.((((((((((.......(((((((((.,,{..((((((....)))))).,}|,{((({{,....,,,............)))}}|{........{{(........)))...,,,,,|,.}))))))))||,..({......)}...,)})))))))))),,.))))))))..}.)))))))).....