Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MACF1_0035600

Sequence Length

366 nt

GC Content

0.4454

GUAUUAGAAAGGGAGUUAAAGGAUCUGACCACCUUGGUCAGUCAGGAGCUGGAGUGUGUGAAUCAGAUUAUCAUCAGCCAGCCUCAAGAAGUUCCUGCUCAACUGUUGAAGGCUCUAGAGAAAGAUGCCAAGAAUCUUCAGAAGUCUCUCAGCUCUGUGAGUGACACUUGGAAUUCCAGGCUACUCCACUUCCAGAAUGCUGUGGAAAUAGAAAAGACUAAAGUGUUAAAUCAGCACACACAGCUAGAAGGCCGACUUCAAGAUCUGAGAGCCUGGGUUGGCAAUAAAAAUCUUAUUCUGAACAGCAAGGGAUCUAACAGUGAAAUAGAUGUUGACAGCCUGAACCUCUGCCUCCAACAGUAUGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-92.6 kcal/mol

Ensemble Metrics

Free Energy: -100.58

Frequency: 0.0000

Diversity: 101.55

Structure Visualization

Structure Prediction

MFE Structure Prediction

.........(((((.((....((.(((((((...)))))))))..(((((((..((.((((.........)))))).)))).)))...)).))))).(((((((((((.((((...((((.(((((.......)))))....((.(((((((.((((((((((...(((((....))))).)))).))).........((((((....(((......)))..(((((.....))))).))))))..((((.....)))).))).))))))).))((((((.((((....((((..(((.......................)))..)))))))).))))))....)))))))).))))))).))))

Thermodynamic Ensemble Prediction

.,.......{((((.((....((.(((((({...})))))))).,({(((((..{(,({{(,.....}}.,))),,.)))))}))...)).))))),(((((((((((.((((...((((.{(((({{{,,..,,,|{{{{..(,({(((({.{{{{||||{|,,.{{|||....|||||,|,|||,}},,,,,....((((((....,{(.....,|},..{{{||.....}}}}}.))))))..((((.....)))).}}}.}})))))}))}|||||}||,,.....||}}.}}|}}....,,.,{|..,||{,{{.......,},))))).,,,)))....})}})))).))))))).))))