Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MACF1_0070100

Sequence Length

212 nt

GC Content

0.5472

CACGAGGUAGAACUAACAUUGAACUUAGAGAGAAAUUCAUCCUACCAGAGGGAGCAUCCCAGGGAAUGACCCCCUUCCGCUCACGGGGUCGAAGGUCCAAACCAUCUUCCCGGGCAGCUUCCCCUACUCGUUCCAGCUCCAGUGCUAGUCAGAGUAACCACAGCUGUACAUCCAUGCCAUCUUCUCCAGCCACCCCAGCCAGUGGAACCAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-48.8 kcal/mol

Ensemble Metrics

Free Energy: -53.01

Frequency: 0.0011

Diversity: 38.92

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((..((((........)))).((........)))))))...((((((..(((.(((((.((((((...........))))))((.(((....))).))))))))))..))))))..(((((...(.(((......))).)...))))).((((.((((.............................))))..)))).......

Thermodynamic Ensemble Prediction

.....(((((..,,,,........||||.{{,....,,.},)))}}.{.((((((..(((.(((((.((((((...........))))))((.(((....))).))))))))))..)))))),,{((((...{.(((......))).}...))))).{{{{.((((........,|,............,.....}}))..))))......,