Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MTO1_0000300

Sequence Length

318 nt

GC Content

0.4560

GUCAGAUGUCAUGUAAUCCUUCCUUUGGUGGCAUCGGAAAGGGACAUUUAAUGAGGGAAGUAGAUGCCUUGGAUGGCCUGUGUUCUCGCAUCUGUGACCAGUCUGGUGUACAUUAUAAAGUAUUAAACCGGCGUAAGGGACCAGCUGUGUGGGGUCUGAGAGCUCAGAUUGAUAGGAAACUCUAUAAACAGAACAUGCAGAAAGAAAUCUUGAAUACACCACUGCUUACUGUUCAGGAGGGAGCUGUAGAAGAUCUUAUUCUUACAGAACCAGAGCCUGAACACACUGGGAAAUGCCGUGUCAGUGGGGUUGUUUUGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-82.4 kcal/mol

Ensemble Metrics

Free Energy: -88.67

Frequency: 0.0000

Diversity: 100.47

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((..(((((...((((.(((....(((((((((((((..((..(((...(((.(((((.((.(.(((......))).).))))))).)))..))).))..)))))))).)))))..))).))))....)))))....)))(..(((((((.(((((((....))))))).(((((....)))))........))))))).(((....)))((((((.((((((......(((((((..((..((((((((.......))).)))))..))....)))))))((((.((......)))))))))))).).)))))..)

Thermodynamic Ensemble Prediction

(((.,{(({(((,(,,{{((({{.,(({{{,||{{|||..|||.|||,..,{|.{{{{|.{{,|.(((......))){|{,||||||{}||{{},,,|({{,({((({{{{........)}))...,||}},.,..,}}}}|}}|||||||}||{{{||,,,,})))}},.(((({....}))))...,,,.,)))))),...,...}||.{(({({.((((((.....,(((((((..((..((((((((,,.....})))}))))..))....)))))))|(((.((......)))))})))))).},})))).))