Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_NF1_0005300

Sequence Length

419 nt

GC Content

0.3866

CUUCCAAUAAAAACAGGACAGCAGAACACACAUACCAAAGUCAGUACUGAGCACAACAAGGAAUGUCUAAUCAAUAUUUCCAAAUACAAGUUUUCUUUGGUUAUAAGCGGCCUCACUACUAUUUUAAAGAAUGUUAACAAUAUGAGAAUAUUUGGAGAAGCUGCUGAAAAAAAUUUAUAUCUCUCUCAGUUGAUUAUAUUGGAUACACUGGAAAAAUGUCUUGCUGGGCAACCAAAGGACACAAUGAGAUUAGAUGAAACGAUGCUGGUCAAACAGUUGCUGCCAGAAAUCUGCCAUUUUCUUCACACCUGUCGUGAAGGAAACCAGCAUGCAGCUGAACUUCGGAAUUCUGCCUCUGGGGUUUUAUUUUCUCUCAGCUGCAACAACUUCAAUGCAGUCUUUAGUCGCAUUUCUACCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-86 kcal/mol

Ensemble Metrics

Free Energy: -94.16

Frequency: 0.0000

Diversity: 120.66

Structure Visualization

Structure Prediction

MFE Structure Prediction

..(((((((.((.(((...((.(((........(((((((.....(((...........(((((((.......)))))))........)))...)))))))....((((((.((.(((.((((((......((....)).....))))))..))).)).))))))................)))))...))).)).)))))))....((((.....((((((..(((....))).)))))).((((.(((((((.((....((((((((...........((.(((....))).)).(((((((((.......)))))))))))))))))((((((((((((((((........))))))))...........))))))))................))))))))).))))....))))

Thermodynamic Ensemble Prediction

,,((({{{{..,.,.|||.||,{({........(((((((..,..(((,..........(((((({.......}}}})))}.......}}}...))))))}....((((((,((.({,.{(((({.....,((,...|}.,.,.})))))..})),)}.))))))........,,,...||||}|}|,|}}},||.}}}))))...,|||{.....((((((..(((....))).))))))..,{(|((||{{{|{{,..,{(((((({,...,,,,,,.{|,{{{....)}}.,.,(((((((((.......))))))))))}}}))}|((((((((((((((((........)))))))),..........))))))))|..........|}|,}},,,}}}}},)}}}.,,.}}})