Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PIP5K1A_0000400

Sequence Length

169 nt

GC Content

0.4793

GUGAUCCUCUCGCCUCAGCCUUGCAAAGUGCUGAGGUACAUACAGGCUUUAGCCGCCGCCGCUGGCCUUACUUUAUGCCCUUUUUACCACCAUGAGGAGAGUAAAGAAUUUCUGUCUUGGAGGCUUGAUUUGAAGUUAGUGGUUGGGUUAGAAGGGAUAGGAUACUAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-47.6 kcal/mol

Ensemble Metrics

Free Energy: -51.05

Frequency: 0.0037

Diversity: 29.81

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((.((((.(((((((((((((...))).))))))))..........(((((((.(.(((((((((.(((..(((.(((..........(((.(((((((........))))).)).))).))).)))..))).))))))))).))))))))...)).)))))))....

Thermodynamic Ensemble Prediction

(({{((((,(((((((((((((...})).)))))))).........,(((((((.(.(((((((((.(((..(((.(((.{,,,.,,,.(({.{{||{{{|,,,,...,}}}}.}}.})),))).)))..))).))))))))).)))))))).),)).)))))))....