Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PIP5K1A_0007000

Sequence Length

277 nt

GC Content

0.5126

UGAAGCCUUCUCCUUCCAAAAAGUUUCGGUCUGGCUCAUCUUUCUCUCGGCGAGCAGGCUCCAGUGGCAACUCCUGCAUUACUUACCAGCCAUCGGUCUCUGGGGAACACAAGGCACAAGUGACAACAAAGGCAGAAGUGGAGCCAGGCGUUCACCUUGGUCGUCCUGAUGUUUUACCUCAGACUCCACCUUUGGAGGAAAUCAGUGAGGGCUCGCCUAUUCCUGACCCCAGUUUCUCACCUCUAGUUGGAGAGACUUUGCAAAUGCUAACUACAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-66 kcal/mol

Ensemble Metrics

Free Energy: -72.22

Frequency: 0.0000

Diversity: 74.89

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((.((((((((((.(((((........(((((((((....(((((.(((.((.(.((((..(((((((.....)))..))))....))))...).)).))))))))(((...((....((....))....))....))))))))))))........(((..(((.(((.((...)).)))))).)))..))))))))).......)))))))))(..............((((((((...........))))))))..((....)).........)

Thermodynamic Ensemble Prediction

(({{((((((((({{(((((..,.....(((((((((..,.,{{,{,{((.((,(,((({..(((((({.....}))..}}}}....})))...),}}.}}}})}}}{{{..,((....((,...}}...,}}....}}})))))))))....,,,,|{{,.{{||(({.{|...,),)))))}.}}},,))))))))).......)))))))))(........,.....{(((((((.{........}))))))))..((....)).........)