Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PPP2R5A_0006700

Sequence Length

447 nt

GC Content

0.3669

UUGGUAUAUGAAUUCUUCUUGAGAUUUUUGGAGAGCCCUGAUUUCCAGCCUAGCAUUGCAAAACGAUACAUUGAUCAGAAAUUCGUACAACAGCUCCUGGAGCUUUUUGAUAGUGAAGAUCCCAGAGAACGUGACUUCCUGAAGACUGUUCUGCACCGAAUUUAUGGGAAAUUUCUUGGAUUAAGAGCAUUCAUCAGAAAACAAAUUAACAACAUUUUCCUCAGGUUUAUAUAUGAAACAGAACAUUUCAAUGGUGUUGCUGAACUUCUUGAAAUAUUAGGAAGUAUUAUCAAUGGCUUUGCAUUGCCACUGAAAGCAGAACAUAAACAAUUUCUAAUGAAGGUUCUUAUUCCUAUGCAUACUGCAAAAGGAUUAGCUUUGUUUCAUGCUCAGCUAGCAUAUUGUGUUGUACAGUUCCUGGAGAAAGAUACAACACUAACAGAGCCA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-94.6 kcal/mol

Ensemble Metrics

Free Energy: -103.32

Frequency: 0.0000

Diversity: 112.73

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((((((((.....((((((.....((((((.......))))))((........))...((((................)))).((....(((..(((.((((........)))).)))..)))....)).....((((.((.((((((...((((................))))....)))))).)).))))......................)))))))))))))))....(((((((((.....)))))).))).(((((((((....))))))))).....)))((((((((....((........))(((((........((((....)))))))))...((((.((((...))))..))))((((((..((.....))..))))))......((((((((...(((.....)))...))))))))...))))))))

Thermodynamic Ensemble Prediction

((((((((((((,,...((((((....{((((((.......))))))|,...||..,|}...,{{{....,,.,,,,|,,..}}}}.....,{(((.,{||}||||||,,,,,,)}}},}}},,}}},..,|},.,|,((((.((.((((((...(((({,{{.....},}},,,}}))....)))))).)).)))).,....................})))))}}}}}}},}....(((((((((.....)))))).))).(((((((((....)))))))))..,}})))((((((((...{((...,,...|||{{{{,.......{(((....)))}}}},,,,.((((.((({...})))..)))),{|{{{.,{{....,)),.))})}),,....((((((((...(((.....)))...))))))))...))))))))