Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_PTK2_0036300

Sequence Length

219 nt

GC Content

0.4018

GCCAAAACACUAAGAAAACUGAUCCAACAAACAUUUAGACAAUUUGCCAACCUUAAUAGAGAAGAAAGUAUUCUGAAAUUCUUUGAGAUCCUGUCUCCAGUCUACAGAUUUGAUAAGGAAUGCUUCAAGUGUGCUCUUGGUUCAAGCUGGAUUAUUUCAGUGGAACUGGCAAUCGGCCCAGAAGAAGGAAUCAGUUACCUAACGGACAAGGGCUGCAAU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-40.5 kcal/mol

Ensemble Metrics

Free Energy: -45.46

Frequency: 0.0003

Diversity: 82.2

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((.........((..(((((((((............((....((((((..(((....)))....(((((((((.......(((((((..(((....)))))).))))........)))))))))((((......))))((((..((((((....)))))).))))))))))))............)).)))))))..))..........)))......

Thermodynamic Ensemble Prediction

(((,...{,({.,(,,({{((((((,........,,,{{...,{{{,,...((,...,}|}.,,.,{{{,{|||,,,,{{{(((({((,.((({...,,|||,,}})},}},,},}))))}|||||{{|..,,..)))}|{{{..||||||}},,))))))}},,}))))|,|{{{{{{....,.,||,,}}}}}}.,)).........,))),,...,