Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_RAD23B_0004300

Sequence Length

453 nt

GC Content

0.5188

CCCAAAGCAGUGUCCACACCAGCACCAGCUACAACUCAGCAGUCAGCUCCUGCCAGCACUACAGCAGUUACUUCCUCCACCACCACAACUGUGGCUCAGGCUCCAACCCCUGUCCCUGCCUUGGCCCCCACUUCCACACCUGCAUCCAUCACUCCAGCAUCAGCGACAGCAUCUUCUGAACCUGCACCUGCUAGUGCAGCUAAACAAGAGAAGCCUGCAGAAAAGCCAGCAGAGACACCAGUGGCUACUAGCCCAACAGCAACUGACAGUACAUCGGGUGAUUCUUCUCGGUCAAACCUUUUUGAAGAUGCAACGAGUGCACUUGUGACGGGUCAGUCUUACGAGAAUAUGGUAACUGAGAUCAUGUCAAUGGGCUAUGAACGAGAGCAAGUAAUUGCAGCCCUGAGAGCCAGUUUCAACAACCCUGACAGAGCAGUGGAGUAUCUUUUAAUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-108.9 kcal/mol

Ensemble Metrics

Free Energy: -115.22

Frequency: 0.0000

Diversity: 113.68

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((..((..((((.......(((..((((...(((....))).))))..)))..........((((((((((.((((....((((....))))(((((...(((.....((((.((((..((((..............(((((............((....))....((.((((.((...((((((......)))))).....)).)))).)).)))))....)))))))).)))).((((.(((...........))).))))...((((.(((..((..(((((..(((...))).....)))))..)).))))))).((((((((......)))..)))))....)))...))))).(((((((....))).))))..).))).)))))))))).....(((((.....)))))........))))..))..))).)(((......)))

Thermodynamic Ensemble Prediction

((((..((..((((.......(({..{(({...,{,..,.||}.}}}}..)))..,.......((((((((((.(((,....((((....))))((((({,.{{,.....((((.((({..((({..............,(({,............||..,.}||.,,|{.((((.{{...((((((......)))))).....,}.)))},)),))}})....}}}})))).}}}}.{,{|||||..,||||,,.,||..,)))...((((.(((..((..(((((..(({...})).....)))))..)).))))))).{{{{{(({{,,,,,|}}.{||}|}....)})},,))))}.||{||||...,))),)}},..}.))).)))))))))).,...{({{{.....))}}}........))))..))..))).)(((......)))