Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_RNF169_0003100

Sequence Length

450 nt

GC Content

0.4578

UGUCCUGCACGUCUCUCAGAUUCAGAGAAUGAAGAACCUUCUCGAGGCCAGAUGACACAGACACAUCGCUCGGCAUUUGUUUCCAAGAACAACUCCUACUCCUUAGCUUUCCUGGCAGGGUAAGAGACUGAUGCUGAAUUCAGUCAGGGGUCUUUGGUUUUGGGGUAUGAGAUAAAAGGGACUGGGGGAGCAAAGGUAUUUGUUGUGGCUACUUUGGUGGGGAGGUGGAAGGGGAGAAAAGAGGUGGGAAUUGGUUUUCAAAUAUGGACUAGGGAAAAAGGGCUGACCUGAAUUUUUCAGGAAAAGUAACACCCCUUUUCUGAUAUCCUCAGGAUAGGAUUGUGCUAAUUGCUGUGCUGCAAAGUGUGACCCUUUUAUCUUGGGAGGAAACAACAAAGUCUUCUUCAGUCUGACAAUAUGCACAGACUCUCCCUCUGGACUUAGUAGGAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-121.2 kcal/mol

Ensemble Metrics

Free Energy: -131.35

Frequency: 0.0000

Diversity: 178.08

Structure Visualization

Structure Prediction

MFE Structure Prediction

..((((((..(((((.....((((.....))))......(((((((((((((.(((.(.(((.......(((((((((((((....))))).(((.(((.(((..(((.....))))))))).)))...)))))))).....)))..).))))))))))))))))...)))))...(((..(.(((((((((((....))))......((((....)))).((((((((((((.(((((((.((((....(((((((........))))))).........(((..((((((...))))))...)))..)))).)))))))...(((((......)))))...(((..((((......)))))))....)))))))))))).((((((.((......)).))))))((((((..........))))))))))))).)..))).)))))).

Thermodynamic Ensemble Prediction

..((((((..(((((({....,,,}}}}.,||,...,||||(({{{((((((,(,{.,.{,{..,|,,,||||{,{((((((,...}}}}},(((,({({(({..(((,,{{{|,|||||||.|||{{{|||||||,..,}})))...|}}||}}}}}}||}}},...})),,...|||,,|}|||{|{(|{{{,,..}}})}},|..||||}}}},)))}}}||||||{{||||{{,,((,(({({{,.,{{{{{{,,......}}}|||{{{.{{{{{{({{..((((({...})))))...|||..||,,{||,||||{{..,,,}}}}}}.)))..}}}|||..((((......)))}.,,....))))))),))))}}((((({{{......)).)))))){(((((.,.....,..)))))))))))))}}}}),,.)))))).