Sequence Details

BLAST PRIMER
Symbol
hsa_SETDB1_0005600
Sequence Length
287 nt
GC Content
0.4843
GUCCAAGUGUGCCUGCCAUCAACUAACUAUCCAGGCUACAGCCUGUACCCCAGGAGGCCAAAUCAACCCUAACUCUGGCUACCAGUACAAGAGACUAGAAGAGUGUCUACCCACAGGGGUAUAUGAGUGUAACAAACGCUGCAAAUGUGACCCAAACAUGUGCACAAACCGGUUGGUGCAACAUGGACUACAAGUUCGGCUACAGCUAUUCAAGACACAGAACAAGGGCUGGGGUAUCCGCUGCUUGGAUGACAUUGCCAAAGGCUCUUUUGUUUGUAUUUAUGCAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-73.7 kcal/mol
Ensemble Metrics
Free Energy: -79.73
Frequency: 0.0001
Diversity: 67.16
Structure Visualization
Structure Prediction
MFE Structure Prediction
((.(....).))((((.....((.((((((((((((...(((..(((((((((((.......))..((((...(((((((.(........))).)))))...((((((((((....)))).....(((((.....)))))(((.((((.......)))).))).......(((((..((....((((((...))))))))..))))).....))))))......)))))))))))))..)))))))))))).....(((...)))......))).))......))))
Thermodynamic Ensemble Prediction
((.{....}.))((((.....{,.,,,(((((((((...(((..(((((((((,.,,,,...,,..{{{{...{(({|||.,,,,....{{(.(({.....}}},))|{(((....||}}|,.,,(((((.....))))),||.{|||..,,,..,|||{|||{{.....,,|||}}}},,}}||((({...})))}|||....)))......,.,.}.}}...}))))))))))))..)))))))))))).....(((...))).....,))}.}}......))))
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