Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_SFMBT2_0009900

Sequence Length

434 nt

GC Content

0.4378

CAAUCAAAGAGAAGUACACAGACUGGACAGAAUUUCUCAUACGUGACUUGACUGGUUCGAGGACAGCACCCGCCAACCUCCUGGAAGGUCCUCUGCGAGGGAAAGGCCCUAUAGACCUCAUUACAGUUGGUUCCUUAAUAGAACUUCAGGAUUCCCAGAACCCUUUUCAGUACUGGAUAGUUAGUGUGAUUGAAAAUGUUGGAGGAAGAUUACGCCUUCGCUAUGUGGGAUUGGAGGACACUGAAUCCUAUGACCAGUGGUUGUUUUACUUGGAUUACAGACUUCGACCAGUUGGUUGGUGUCAAGAGAAUAAAUACAGAAUGGACCCACCUUCAGAAAUCUAUCCUUUGAAGAUGGCCUCUGAAUGGAAAUGUACUCUGGAAAAAUCCCUUAUUGAUGCUGCCAAAUUUCCUCUUCCAAUGGAAGUGUUUAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-101.4 kcal/mol

Ensemble Metrics

Free Energy: -111.46

Frequency: 0.0000

Diversity: 158.15

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.((((.(((.((((((((..(((........(((((((((..((((.(((((((.(((((...((....))(((((..((((.(((((.......((((.....))))...)))))..........(((((.......)))))..(((((((..((...((((..((((.(((.(((((..((((((((................))))))))....))))).))).))))))))...)))))))))....)))).)))))......(((.....))).)))))))))))))))).))))...)))))......)))..))...(((..((((((...(((((.......)))))..)))))))))...))))))..(((....)))))).))))))((.....((((((.........)))))).....))

Thermodynamic Ensemble Prediction

(,,((((.(((,((((((({..(((........(((({{{{{.{((({,{((((({{{((((,,,{,..,,|((({({..{{{{.{(({{.,{{{..((((.....)))).,}))))),....,,},,|||{{{,.....}},,}||||||,{{{{({.,{,,{{{{((({{(({|..,,|}}||||,|||}}}},,,.,{{{{{..,,,..,,))))}}}},},||}|||}}},}}...))}}})))),}}|||}}}||}}},..,}},||,....,,|{|,||||||,,,,)))))),))}.,}}}}|,.....|||..}|,..(((.{((((((...{{{{{.,,,,}})}))),,))))}}})}...)))}))}}(((....)))))).))))))((.....((((((.........)))))).....))