Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_SLC24A2_0000500

Sequence Length

607 nt

GC Content

0.4942

GGAGGUUCAGAGAAAAGGCUUCAAUUCUCCACAAGAUCGCCAAGAAGAAAUGUCAUGUGGAUGAGAACGAGAGGCAGAAUGGGGCUGCCAACCACGUGGAAAAAAUUGAGCUUCCAAACAGCACCAGCACAGAUGUUGAAAUGACACCAUCCAGUGAUGCUUCAGAACCUGUACAAAAUGGAAAUCUCUCCCACAACAUUGAAGGUGCAGAAGCCCAGACCGCUGAUGAGGAGGAGGACCAGCCUCUCAGCCUUGCCUGGCCUUCUGAAACCCGCAAGCAAGUCACGUUUCUGAUUGUUUUCCCCAUAGUGUUUCCUCUCUGGAUUACGUUACCUGACGUUCGCAAACCUUCAUCGAGGAAGUUUUUUCCCAUCACGUUCUUUGGCUCCAUUACCUGGAUUGCAGUAUUCUCUUACUUGAUGGUCUGGUGGGCGCACCAGGUUGGAGAGACAAUUGGCAUCAGUGAAGAGAUUAUGGGCCUGACCAUCUUGGCUGCUGGGACCUCCAUCCCUGAUCUUAUCACCAGUGUCAUAGUGGCCCGGAAGGGGUUAGGGGACAUGGCUGUGUCCAGCUCUGUUGGAAGCAACAUUUUUGACAUCACUGUAGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-172.3 kcal/mol

Ensemble Metrics

Free Energy: -185.08

Frequency: 0.0000

Diversity: 238.1

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((.(((((((...((((((...((((((((.((((........))....)).)))))).))........(((((.......)))))......((((........(((.(((((....((....))((((...(((((....(((......)))....)))))...))))......)))))..)))..))))....(((..(((.((((((.((((.(.(((((.((((.((....))..)))))))))...).)))).))))))..)))..)))).)))))...)))))))....)))))(((((((((((((((..((((..(((((....))))).........))))..))))))).......((((...(((((((((((((.((.((.((.((((.((.((((((.(((((.((((((...)))).)).))))).))))))))...((((((..((((.(((((((..((((..........))))...((((......))))))))))).))))..))))))..)))))).))))))))))))))))))))).(((.((((((...)))))).))).............)))))).))

Thermodynamic Ensemble Prediction

(((({{(((((({...,(((({..,{{(((({{.{{{,,,,,...,|,..{||},||}|||.|||{{,{,{{((((,.,{{{{,}}|}|......{(({,,......,,{,|||||...,({..{,||({,(.{||((,,....{|,,,|,,,|||,||,}}}||...}}}}......}|||,..,,||,},,,....,{(..(((.((((((.((((.(.(((((.((((.{(....})..)))))))))...).)))).))))))..)))..}||{{|||||{..,..,)))})}}}},))||||,{||..,||||},{{{{..(((((....)))))...,...{{||},..)))),,),,,}}}}}|||.},|}}}}|||||((({....,}|}}..||{{({.((((({{({{({((.{((((((....))))))|{{|,,,,..)}}}.|,))})}||||,}}}|,|||{{{{{,{,{{.||,.||||{{{({({,..,,.|||||||||||.}},|,.},}}}}..,}))}},}},.}))))))))}|||||||.,||,}|)|}}..|||||}},}),,,},}}}}},},}),)})}.})