Sequence Details

BLAST PRIMER
Symbol
hsa_SMARCC1_0004400
Sequence Length
461 nt
GC Content
0.4230
AAGGAGCUGAAGAGGAAAAAAUGGAAGCCGACCCUGAUGGUCAGCAGCCUGAAAAGGCAGAAAAUAAAGUGGAAAAUGAAACGGAUGAAGGUGAUAAAGCACAAGAUGGAGAAAAUGAAAAAAAUAGUGAAAAGGAACAGGAUAGUGAAGUGAGUGAGGAUACCAAAUCAGAAGAAAAGGAGACUGAAGAGAACAAAGAACUCACUGAUACAUGUAAAGAAAGAGAAAGUGAUACUGGGAAGAAGAAAGUAGAACAUGAAAUUUCCGAAGGAAAUGUUGCCACAGCCGCAGCAGCUGCUCUUGCCUCAGCGGCUACCAAAGCCAAGCACCUGGCUGCAGUGGAAGAAAGAAAGAUCAAGUCCCUGGUAGCUCUCUUGGUUGAGACACAAAUGAAGAAACUAGAGAUCAAACUUCGACAUUUUGAAGAGCUGGAAACUAUCAUGGACAGAGAGAAAGAAGCU

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-85.8 kcal/mol
Ensemble Metrics
Free Energy: -92.63
Frequency: 0.0000
Diversity: 102.13
Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((((((............(((.(((((...((((.(((.(((((((((......)))........(((.........((........)).......)))........................((........))......(((.(((((((............((((............))))............)))))))..))).................((..((((...........))))..)).....((((((...))))))(((((.......))))).))))))...)))))))))))).))).(((((......))))).(((.(((.((........))...)))))).)))))).)))((((.........((((((...((((........((((((....))))))..))))...)).))))...............))))
Thermodynamic Ensemble Prediction
.,{{(((({............{((.{(({(.,,{(((.(((,((({(((({...,|||..........{({,.........{........(({......)))....,...................{{........}}...,,.(((.(((((((............((((............))))............)))))))..))).},,.............((..((((...........))))..)).....((((((...)))))){||{|},,.,},}},})}))))))...)))))))))))).))}.(((((......))))).{{{.{{{.,,........})...)))))},|}|}||{{||((((....,.....||,.,.,}}}}}}},.,...((((({....)))))).,||,....}},}}}.,,.,.,.........))))
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