Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_TTC3_0016100

Sequence Length

334 nt

GC Content

0.3952

GGCCUACACACCUAGGAGUUUAUCAGCACCUAUAUUUACUACUUCACUUAACUUUGUGGAGAAGGAAAGAGAUUUCAGAAAAAUUAAUCACGAAAUGGCCAACGGUGGUAAUCAGAAUCUAAAGGUGGCGGAUGAGGCGUUGAAGGUAGAUGAUUGUGACUGUCAUCCUGAAUUUUCACCACCAUCAAGUCAGCCUCCAAAACAUAAAGGAAAACAAAAAUCUCGAAACAAUGAAUCAGAAAAGUUCAGUUCUAGUUCACCAUUGACUUUACCAGCAGAUUUGAAGAACAUCUUGGAGAAACAGUUUUCUAAAUCUUCCAGAGCUGCACACCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-62.3 kcal/mol

Ensemble Metrics

Free Energy: -69.12

Frequency: 0.0000

Diversity: 59.04

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((........((((.(((....))).))))......((.((((((........)))))).))((((....))))....................))))...((((................((.(((.(((((((.(.(((((((.((((((.......))))))....))))))).).)).)))..)).))).))........................((((.....(((((.((((........)))).)))))...))))........((((.((((((((.....((((((((....)))))))).)))).)))).)))).))))..

Thermodynamic Ensemble Prediction

((((........((((.(({....})).))))...,..((.((((((........)))))).)),,||...{{{||.,,........}}..},,,,))))...((((,,,.............(({(((.(((({((.(.(((((((,((((((.......)))))).,..))))))),).)),)),.})),})),||..........|},...........,........(((((.((((........)))).)))))...}))}..,,,...((((.((((((((.....((((((({....}))))))).))))},))).)))).})))..