Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_UBAC2_0004400

Sequence Length

402 nt

GC Content

0.3930

AUUUGGAGGUUGAUAUGUGGAAGAAUAAUUUGCCUUGAUUUGAAAGAUACUUUCUGCAGUAGUCUGCUUAUUUAUAAUUUUAGGAUAUUUGAAAGAAGAUAUGGAAGCAGAAAAUUUGCAUCCUUUUUGCUGGGUUCCUGGGUUUUGUCAGCCUUAUUUGACUUUCUCCUCAUUGAAGCUAUGCAGUAUUUCUUUGGCAUCACUGCAGCUAGUAAUUUGCCUUCUGGAUUCCUGGCACCUGUGUUUGCUCUGUUUGUACCAUUUUACUGCUCCAUACCAAGAGUCCAAGUGGCACAAAUUCUGGGUCCGUUGUCCAUCACAAACAAGACAUUGAUUUAUAUAUUGGGACUGCAGCUUUUCACCUCUGGUUCCUACAUCUGGAUUGUAGCCAUAAGUGGACUU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-85.2 kcal/mol

Ensemble Metrics

Free Energy: -93.71

Frequency: 0.0000

Diversity: 121.34

Structure Visualization

Structure Prediction

MFE Structure Prediction

...(((((........((((..(((((..............(((((...))))).((((....)))).................((((((......))))))(((.(((((...))))).)))...(((((((.(((.((((....(((((......))))).....)).))..))).))).)))).........((((.(((.(..(((((.(((((.......))))).)))))..).)))..)))).)))))...)))).......)))))......(((((((.(((((((((..(((((((.((.((((............)))).))...........(((((((.((........)).)))))))...))))))))))).)))))...)))))))

Thermodynamic Ensemble Prediction

..,(((((((.{{{.(((......}}}}}}.}}}},.,...(((((...))))).((((....}|||,,...,,,..{{{{{{,,,,{||,,,,..}}}|||(({,(((((,,,|,|||,,,|....((((((.(((.{(((....(((({......})))).....)),}}..))).))).)))|,,.......{(((.(((.{..(((((.{(({{,,,....))))}.)))))..,.)))..)))}..},.}}},},}}}}}.}}}))))),,,}},{((((((.(((((((({..(((((((.{{.((((............)))).})...........(((((({.((........)).}))))))...}}))))))))).)))))...)))))))