Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_YAP1_0003200

Sequence Length

296 nt

GC Content

0.5372

GUCCUCUUCCUGAUGGAUGGGAACAAGCCAUGACUCAGGAUGGAGAAAUUUACUAUAUAAACCAUAAGAACAAGACCACCUCUUGGCUAGACCCAAGGCUUGACCCUCGUUUUGCCAUGAACCAGAGAAUCAGUCAGAGUGCUCCAGUGAAACAGCCACCACCCCUGGCUCCCCAGAGCCCACAGGGAGGCGUCAUGGGUGGCAGCAACUCCAACCAGCAGCAACAGAUGCGACUGCAGCAACUGCAGAUGGAGAAGGAGAGGCUGCGGCUGAAACAGCAAGAACUGCUUCGGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-85.5 kcal/mol

Ensemble Metrics

Free Energy: -91.1

Frequency: 0.0001

Diversity: 82.71

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((((((((((...((((.......))))...)))))).)))).........................(((((.....)))))....)))(((.(((..(((....)))..))).)).....(((..((.....))...)))..(((.......)))(((((.(((((((((..........))).)).)))).)))))(((((..((((..((((((........)))..((((((...)))))).)))....))))..))))).((((((.(((......))).)))))).)

Thermodynamic Ensemble Prediction

{((((((((((((...((((.......))))...)))))).))))......................,..,,,{|,,...|||||{{..|||,,,,(({..({,.||,||||.}}}..)},,..|||..||,}},.},,|,||}..{|,...{{{{{,,({(((.(((((({{{.|,,,,....))).)).)))}.)))))(((((..((((..(({(((.,......)))..((((((...)))))).)))....))))..))))),|(({{,.|||,.....|||,}}}})),)