Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ZNF292_0007000

Sequence Length

573 nt

GC Content

0.3979

ACACUCCUAGAAUAUGCAGAGAAAUGGAAAACUUCAGAAGAUCCUUUACCUUUAUUGGAGGUAUACACAGUGGCUAUCCAAAGUUAUGUUAAAGCCCGACCUUAUCUUACCUCUGAAUGUGAAAAUGUAGCCUUGGUUCUGGAACGCUUGGCAUUAAGCUGUGUUGAACUUUUACUGUGUCUGCCUGUUGAGUUAUCAGAUAAACAGUGGGAACAAUUUCAGACACUGGUGCAGGUAGCUCAUGAAAAGCUGAUGGAGAAUGGCAGCUGUGAAUUGCAUUUUUUAGCUACUCUAGCUCAAGAGACUGGGGUGUGGAAAAACCCGGUACUGUGCACUAUUCUUUCCCAGGAACCAUUGGAUAAGGAUAAAGUGAAUGAAUUUUUAGCUUUUGAGGGUCCCAUCUUGUUGGAUAUGAGAAUUAAACAUCUAAUCAAAACAAAUCAGUUAAGUCAAGCAACUGCUCUAGCAAAGCUGUGUUCUGACCAUCCAGAGAUUGGCAUAAAAGGUAGUUUUAAGCAAACUUACCUUGUCUGUCUUUGUACAUCAUCACCAAAUGGAAAGUUAAUCGAAGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-125.5 kcal/mol

Ensemble Metrics

Free Energy: -139.01

Frequency: 0.0000

Diversity: 214.55

Structure Visualization

Structure Prediction

MFE Structure Prediction

((..(((....((((.(((.((.((((....(((((((((......(((((((...)))))))..((((((.((((((((.((((.......(((...((((((((.....((((((..((.........((........))(((((..(((.....))))))))....((((((((((((((.((....))....)))))..))))))))).))..))))))....)))).)))).))).......))))..))))...)))).)))))).............(((((...)))))..(.((((((((...........)))))).)).).((((((((((..((((......))))..))))))..)))).............)))))))))...)))).)).))).)))).(((........)))..(((.((((...(((((..((..(((....)))...))..))))))))).))).....(((((((.((((....(((((((((.....)))).))))))))).)))))))................)))..))(.........)

Thermodynamic Ensemble Prediction

({.,{{{..,,,{((,({{,{,.,(((,...{{((((({(.,,{,.{{(({{,...})|||||.,(((((({((((({{{.{{((,{{,,..{({...{,,,,,,{.,,,,|||{||,||||...,|||,|,..(((((.,,{(((({{({{..,,})),}},}|}}}}|,,{|||||||{||}||,.,{{|,,,{|}},}..,|||||}||,,,..}))},,})},)}}},})))})))}}..,,.||||{,||||,,,|}||{||||,|.,,|,|||||||}|||{{.,,})))}.,|}||((((((.,.........)))))).}}.}.((((((((((..((((......))))..)))))),.}))).,.......,}},))))))))),},}}}}.||,|||{||,|.{{,........))}.,||,.{{||...{{|||..{{,,{{{..,.}}}...}}..}))})})))}))),....(((((({.((({...,(((((((((.....))))}})))))))).})))))}.......,..|,....)),..},,...}..,}})