Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ZNF292_0007100

Sequence Length

710 nt

GC Content

0.3986

ACACUCCUAGAAUAUGCAGAGAAAUGGAAAACUUCAGAAGAUCCUUUACCUUUAUUGGAGGUAUACACAGUGGCUAUCCAAAGUUAUGUUAAAGCCCGACCUUAUCUUACCUCUGAAUGUGAAAAUGUAGCCUUGGUUCUGGAACGCUUGGCAUUAAGCUGUGUUGAACUUUUACUGUGUCUGCCUGUUGAGUUAUCAGAUAAACAGUGGGAACAAUUUCAGACACUGGUGCAGGUAGCUCAUGAAAAGCUGAUGGAGAAUGGCAGCUGUGAAUUGCAUUUUUUAGCUACUCUAGCUCAAGAGACUGGGGUGUGGAAAAACCCGGUACUGUGCACUAUUCUUUCCCAGGAACCAUUGGAUAAGGAUAAAGUGAAUGAAUUUUUAGCUUUUGAGGGUCCCAUCUUGUUGGAUAUGAGAAUUAAACAUCUAAUCAAAACAAAUCAGUUAAGUCAAGCAACUGCUCUAGCAAAGCUGUGUUCUGACCAUCCAGAGAUUGGCAUAAAAGGUAGUUUUAAGCAAACUUACCUUGUCUGUCUUUGUACAUCAUCACCAAAUGGAAAGUUAAUCGAAGAGAUUUCAGAAGUUGAUUGCAAAGAUGCACUGGAAAUGAUCUGUAACUUAGAAUCUGAGGGUGAUGAAAAAAGCGCUCUUGUUUUAUGUACUGCGUUUUUGUCACGUCAGCUCCAACAAGGAGAUAUGUACUGCGCUUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-163.2 kcal/mol

Ensemble Metrics

Free Energy: -180.28

Frequency: 0.0000

Diversity: 250.83

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.........((((.(((.((.((((....(((((((((......(((((((...)))))))..((((((.((((((((.((((.......(((...((((((((.....((((((..((.........((........))(((((..(((.....))))))))....((((((((((((((.((....))....)))))..))))))))).))..))))))....)))).)))).))).......))))..))))...)))).)))))).............(((((...)))))..(.((((((((...........)))))).)).).((((((((((..((((......))))..))))))..)))).............)))))))))...)))).)).))).)))).(((........)))..(((.((((...(((((..((..(((....)))...))..))))))))).))).....(((((((.((((....(((((((((.....)))).))))))))).)))))))....((((((((....(((((((((...((..(..((((((........((((....)))))))))).)..))..))))))....)))...)))))))).((((((((................))))))))))((.(((((((((.....)))).......))).)).))

Thermodynamic Ensemble Prediction

((.......,.{{{(,(({,{{.{(((....(((((((((...,..{((({{,...}))||||.,((((((,((((((((.{(((,{,,,..(({...({{{,,{{...,,{{{{||,,{|,...,||,,||..{((((...,(((({{({{..,,})),))}},))))|,,{|||||||{||,||...,||,,,,|}}}}..,|||||}|,,}}..)))},}}},,)})}.}))),))),,.....||||..}}}|..,}}}),}}}}}}...|,||||||||{||{{.,,}))}}.,}}||((((((.,.........)))))).,,,}.((((((((((..((((......))))..)))))),.})))..........,..))))))))).,.))}},||,|||,|}}|,{{,........}}}.,,,..{{{,...,,|||..||{((((....|||...}}..}))})}}}|{||}.....|||{(({.((((...,(((((((((.....))))}})))))))).)))}})|,,,,({((({((...{{({,,,,,{{{{.....}}||{{{{..{{{{{{{(((,,{{||||,,|||.....))}||}||}|{{,,|}}|{{}||}}|},.,{{{{|{|,,..,},,,,.,,,,,)))))))))},|.|}))}||||,....)),),,,,}},),},))}))